Compare similarity measures
We compared the clusterings on the similarity matrices with different similarity measures.
dataset
semantic
Jaccard
Dice
overlap
kappa
Compare similarity measures - random_GO_BP
x
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_GO_BP
x
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_DO
x
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_KEGG
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_Reactome
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_MsigDB_C2_CGP
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_MsigDB_C3_GTRD
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_MsigDB_C3_MIR_Legacy
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_MsigDB_C3_MIRDB
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_MsigDB_C3_TFT_Legacy
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_MsigDB_C4_CGN
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_MsigDB_C4_CM
x
x
x
x
Compare similarity measures - EBI_Expression_Atlas_MsigDB_C7
x
x
x
x