Figure 1.Compare clustering results. Left panel: The difference score, number of clusters and the block mean of different clusterings. Right panel: Concordance between clustering methods. The concordance measures how similar two clusterings are. The definition of the concordance score can be found here.
Table 1.Number of clusters identified by each clustering method. Numbers in the table indicate the number of clusters. The numbers inside the parentheses are the number of clusters with size >= 5.
| ID | binary_cut | kmeans | pam | dynamicTreeCut | mclust | apcluster | hdbscan | fast_greedy | louvain | walktrap | MCL | Details |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| E-GEOD-104288_g2_g1 | 12(3) | 22(20) | 2(2) | 55(55) | 4(4) | 104(45) | 6(6) | 26(20) | 26(20) | 2(2) | 220(3) | view |
| E-GEOD-11285_A-AFFY-44_g1_g2 | 14(7) | 20(18) | 2(2) | 84(84) | 4(4) | 155(64) | 4(4) | 20(15) | 14(13) | 2(2) | 237(6) | view |
| E-GEOD-11839_A-AFFY-44_g2_g1 | 1(1) | 19(16) | 2(2) | 70(70) | 5(5) | 123(53) | 14(14) | 20(13) | 15(14) | 7(2) | 175(3) | view |
| E-GEOD-12446_A-AFFY-44_g1_g4 | 1(1) | 10(9) | 2(2) | 19(19) | 6(6) | 35(15) | 4(4) | 37(8) | 36(10) | 1(1) | 74(1) | view |
| E-GEOD-12452_A-AFFY-44_g2_g1 | 5(5) | 23(22) | 2(2) | 106(106) | 12(12) | 192(83) | 2(2) | 18(14) | 16(14) | 2(2) | 164(3) | view |
| E-GEOD-12513_A-AFFY-44_g4_g3 | 1(1) | 25(17) | 36(23) | 48(47) | 3(3) | 78(38) | 3(3) | 41(24) | 35(27) | 1(1) | 329(2) | view |
| E-GEOD-16066_A-AFFY-44_g2_g1 | 6(6) | 20(19) | 2(2) | 82(82) | 12(12) | 140(66) | 18(18) | 19(14) | 17(15) | 2(2) | 197(3) | view |
| E-GEOD-1615_A-AFFY-33_g6_g5 | 2(2) | 29(27) | 2(2) | 124(124) | 4(4) | 221(102) | 2(2) | 25(21) | 23(21) | 3(2) | 221(4) | view |
| E-GEOD-1615_A-AFFY-34_g3_g2 | 2(2) | 9(4) | 2(2) | 8(8) | 7(3) | 15(6) | 2(2) | 52(1) | 52(1) | 1(1) | 61(1) | view |
| E-GEOD-19314_A-AFFY-44_g2_g4 | 4(4) | 28(28) | 2(2) | 97(97) | 19(19) | 153(71) | 21(21) | 12(10) | 12(12) | 2(2) | 129(2) | view |
| E-GEOD-20193_A-AFFY-44_g3_g1 | 3(3) | 32(22) | 2(2) | 82(82) | 2(2) | 134(64) | 14(14) | 28(23) | 29(25) | 3(2) | 434(4) | view |
| E-GEOD-20602_A-AFFY-33_g1_g2 | 2(2) | 26(25) | 2(2) | 96(96) | 7(7) | 171(79) | 3(3) | 19(16) | 16(16) | 10(2) | 238(3) | view |
| E-GEOD-21610_A-AFFY-44_g5_g1 | 1(1) | 30(23) | 50(28) | 62(62) | 6(6) | 111(49) | 13(13) | 30(24) | 29(24) | 1(1) | 368(6) | view |
| E-GEOD-22611_A-AFFY-44_g1_g6 | 4(3) | 17(11) | 2(2) | 28(28) | 3(3) | 48(25) | 8(8) | 45(12) | 36(14) | 1(1) | 187(2) | view |
| E-GEOD-22611_A-AFFY-44_g2_g3 | 2(2) | 22(17) | 2(2) | 57(57) | 5(5) | 98(39) | 8(8) | 30(19) | 26(23) | 3(2) | 264(3) | view |
| E-GEOD-22611_A-AFFY-44_g9_g4 | 1(1) | 25(20) | 3(3) | 70(70) | 5(5) | 136(49) | 14(14) | 25(22) | 22(21) | 3(2) | 357(4) | view |
| E-GEOD-24849_A-AFFY-44_g4_g3 | 3(3) | 13(11) | 3(3) | 36(36) | 4(4) | 67(27) | 8(8) | 29(16) | 24(16) | 1(1) | 202(2) | view |
| E-GEOD-25746_A-AFFY-44_g2_g1 | 3(3) | 16(14) | 3(3) | 45(45) | 3(3) | 75(38) | 8(8) | 26(16) | 17(14) | 5(2) | 201(4) | view |
| E-GEOD-26656_A-AFFY-44_g4_g2 | 1(1) | 26(22) | 2(2) | 91(91) | 4(4) | 179(69) | 18(18) | 26(21) | 23(21) | 1(1) | 302(4) | view |
| E-GEOD-28542_A-AFFY-141_g8_g6 | 4(4) | 28(28) | 2(2) | 106(106) | 4(4) | 181(87) | 2(2) | 17(11) | 11(11) | 2(2) | 190(3) | view |
| E-GEOD-29598_A-AFFY-37_g4_g3 | 4(3) | 24(20) | 2(1) | 77(76) | 4(3) | 136(63) | 3(2) | 42(35) | 37(33) | 1(1) | 567(4) | view |
| E-GEOD-31812_A-AFFY-141_g1_g2 | 4(4) | 22(22) | 2(2) | 119(119) | 4(4) | 202(91) | 2(2) | 14(11) | 11(10) | 2(2) | 148(2) | view |
| E-GEOD-31986_A-AFFY-141_g1_g3 | 9(6) | 32(29) | 69(42) | 89(89) | 3(3) | 149(66) | 3(3) | 17(14) | 17(17) | 2(2) | 141(4) | view |
| E-GEOD-32924_A-AFFY-44_g3_g1 | 4(1) | 4(3) | 2(1) | 5(4) | 1(1) | 9(4) | 1(1) | 36(0) | 36(0) | 1(1) | 37(0) | view |
| E-GEOD-3307_A-AFFY-33_g1_g7 | 1(1) | 32(30) | 4(4) | 108(108) | 5(5) | 201(76) | 5(5) | 21(17) | 17(17) | 4(2) | 225(4) | view |
| E-GEOD-3307_A-AFFY-34_g14_g15 | 3(3) | 29(24) | 2(2) | 63(63) | 2(2) | 108(54) | 3(2) | 33(24) | 28(26) | 2(2) | 352(3) | view |
| E-GEOD-3307_A-AFFY-34_g14_g20 | 4(2) | 17(12) | 2(2) | 38(38) | 2(2) | 70(28) | 5(5) | 61(29) | 54(30) | 1(1) | 293(1) | view |
| E-GEOD-3307_A-AFFY-34_g14_g24 | 6(3) | 28(19) | 2(2) | 55(55) | 4(4) | 88(37) | 8(8) | 54(29) | 49(31) | 1(1) | 353(2) | view |
| E-GEOD-3307_A-AFFY-34_g14_g25 | 1(1) | 13(9) | 17(13) | 22(21) | 1(1) | 36(15) | 4(4) | 72(5) | 68(6) | 1(1) | 169(0) | view |
| E-GEOD-33294_g1_g2 | 6(6) | 29(26) | 2(2) | 95(95) | 5(5) | 163(72) | 2(2) | 22(15) | 17(16) | 4(2) | 215(3) | view |
| E-GEOD-33643_A-AFFY-44_g7_g1 | 4(4) | 17(13) | 2(2) | 38(38) | 3(3) | 70(33) | 3(3) | 37(16) | 34(18) | 1(1) | 241(5) | view |
| E-GEOD-33643_A-AFFY-44_g7_g5 | 1(1) | 23(22) | 2(2) | 117(117) | 5(5) | 201(92) | 2(2) | 19(17) | 15(14) | 2(2) | 136(3) | view |
| E-GEOD-35006_A-AFFY-44_g2_g1 | 1(1) | 32(25) | 2(2) | 98(98) | 2(2) | 175(74) | 13(13) | 24(18) | 19(19) | 2(2) | 379(3) | view |
| E-GEOD-35006_A-AFFY-44_g6_g5 | 4(2) | 23(20) | 41(28) | 55(54) | 3(3) | 102(38) | 8(8) | 43(28) | 38(31) | 1(1) | 410(1) | view |
| E-GEOD-36509_A-AFFY-141_g4_g6 | 4(4) | 20(20) | 91(58) | 115(115) | 3(3) | 205(87) | 3(3) | 21(20) | 20(20) | 2(2) | 307(5) | view |
| E-GEOD-36761_g2_g1 | 1(1) | 31(27) | 2(2) | 116(116) | 3(3) | 215(88) | 2(2) | 18(14) | 18(16) | 9(2) | 126(3) | view |
| E-GEOD-3678_A-AFFY-44_g1_g2 | 4(4) | 20(16) | 4(4) | 48(48) | 3(3) | 82(40) | 11(11) | 32(22) | 24(18) | 1(1) | 254(7) | view |
| E-GEOD-37258_A-AFFY-44_g3_g2 | 2(2) | 22(16) | 2(2) | 56(56) | 4(4) | 99(40) | 11(11) | 29(17) | 25(17) | 1(1) | 280(7) | view |
| E-GEOD-37911_A-AFFY-141_g3_g1 | 1(1) | 25(21) | 68(46) | 82(82) | 2(2) | 155(64) | 3(3) | 34(29) | 29(26) | 1(1) | 506(5) | view |
| E-GEOD-37911_A-AFFY-141_g3_g2 | 10(6) | 19(16) | 2(2) | 99(99) | 3(3) | 183(76) | 4(4) | 21(19) | 21(21) | 2(2) | 261(4) | view |
| E-GEOD-39121_g1_g2 | 1(1) | 21(20) | 4(4) | 123(123) | 5(5) | 221(86) | 2(2) | 16(14) | 16(15) | 5(2) | 117(2) | view |
| E-GEOD-40750_A-AFFY-44_g2_g1 | 7(6) | 22(21) | 2(2) | 83(83) | 3(3) | 156(65) | 25(25) | 25(22) | 20(20) | 7(2) | 267(5) | view |
| E-GEOD-41322_A-AFFY-141_g1_g2 | 1(1) | 22(19) | 2(2) | 70(70) | 8(8) | 113(56) | 8(8) | 15(10) | 10(10) | 2(2) | 148(1) | view |
| E-GEOD-41459_A-AFFY-44_g1_g2 | 20(6) | 15(11) | 2(2) | 28(28) | 5(5) | 43(22) | 4(4) | 43(11) | 38(13) | 1(1) | 175(3) | view |
| E-GEOD-41678_A-AFFY-141_g8_g7 | 5(5) | 33(28) | 2(2) | 82(82) | 4(4) | 138(65) | 12(12) | 28(24) | 21(20) | 3(2) | 419(3) | view |
| E-GEOD-41745_g2_g1 | 4(4) | 29(29) | 2(2) | 94(94) | 7(7) | 137(78) | 19(19) | 12(10) | 11(10) | 3(2) | 63(2) | view |
| E-GEOD-44097_A-AFFY-44_g4_g3 | 20(8) | 30(28) | 2(2) | 82(82) | 4(4) | 115(63) | 14(14) | 17(10) | 12(10) | 2(2) | 188(2) | view |
| E-GEOD-44379_g2_g1 | 5(4) | 25(17) | 43(29) | 57(57) | 6(6) | 95(42) | 13(13) | 34(22) | 29(20) | 1(1) | 310(2) | view |
| E-GEOD-45581_A-AGIL-28_g3_g1 | 22(8) | 23(18) | 38(23) | 47(47) | 3(3) | 86(36) | 3(2) | 22(16) | 20(15) | 3(2) | 145(4) | view |
| E-GEOD-45581_A-AGIL-28_g3_g2 | 8(7) | 17(15) | 3(3) | 42(42) | 2(2) | 64(34) | 4(3) | 22(11) | 19(12) | 5(2) | 146(5) | view |
| E-GEOD-46513_g2_g1 | 1(1) | 18(13) | 2(2) | 25(25) | 3(3) | 42(22) | 3(3) | 40(14) | 37(15) | 1(1) | 135(1) | view |
| E-GEOD-46590_A-AFFY-141_g1_g2 | 2(2) | 18(17) | 2(2) | 91(91) | 5(5) | 164(67) | 16(16) | 24(20) | 19(15) | 2(2) | 360(4) | view |
| E-GEOD-46665_g3_g2 | 4(4) | 18(18) | 2(2) | 77(77) | 14(14) | 132(63) | 13(13) | 14(10) | 11(9) | 2(2) | 236(2) | view |
| E-GEOD-46687_A-AFFY-44_g3_g2 | 4(4) | 26(24) | 4(4) | 105(105) | 3(3) | 179(81) | 3(3) | 23(19) | 20(17) | 3(2) | 254(4) | view |
| E-GEOD-48350_A-AFFY-44_g6_g2 | 3(3) | 19(17) | 2(2) | 59(59) | 3(3) | 97(45) | 3(2) | 38(26) | 32(28) | 1(1) | 343(2) | view |
| E-GEOD-50697_A-AFFY-44_g1_g2 | 9(4) | 20(20) | 2(2) | 95(95) | 8(8) | 162(72) | 21(21) | 14(12) | 11(10) | 3(2) | 126(1) | view |
| E-GEOD-51005_g2_g1 | 1(1) | 17(11) | 2(2) | 25(25) | 7(6) | 53(18) | 5(5) | 31(11) | 25(17) | 1(1) | 113(1) | view |
| E-GEOD-51258_A-AFFY-44_g1_g2 | 1(1) | 22(16) | 3(3) | 102(102) | 4(4) | 198(76) | 18(18) | 23(20) | 20(20) | 2(2) | 317(2) | view |
| E-GEOD-52143_A-AFFY-141_g4_g3 | 4(4) | 24(18) | 3(3) | 68(68) | 4(4) | 102(55) | 9(9) | 42(27) | 35(26) | 1(1) | 421(3) | view |
| E-GEOD-53284_A-AFFY-141_g2_g1 | 4(4) | 26(22) | 2(2) | 94(94) | 2(2) | 168(67) | 3(2) | 26(22) | 27(27) | 1(1) | 493(4) | view |
| E-GEOD-53514_A-AFFY-141_g1_g2 | 1(1) | 27(25) | 2(2) | 131(131) | 3(3) | 233(94) | 34(34) | 21(19) | 16(16) | 2(2) | 184(4) | view |
| E-GEOD-53965_A-AFFY-141_g2_g1 | 3(3) | 33(31) | 2(2) | 109(108) | 3(3) | 196(81) | 2(2) | 21(12) | 14(13) | 2(2) | 171(3) | view |
| E-GEOD-54846_g1_g2 | 1(1) | 34(31) | 90(58) | 109(109) | 5(5) | 196(82) | 2(2) | 18(17) | 18(17) | 6(2) | 188(3) | view |
| E-GEOD-55048_g1_g2 | 10(6) | 28(25) | 71(47) | 85(85) | 6(6) | 152(73) | 3(3) | 18(16) | 19(17) | 4(2) | 273(3) | view |
| E-GEOD-55282_g4_g5 | 1(1) | 19(9) | 22(15) | 30(29) | 2(2) | 53(18) | 3(3) | 59(14) | 60(11) | 1(1) | 217(0) | view |
| E-GEOD-56235_g2_g1 | 2(2) | 26(24) | 2(2) | 112(112) | 7(7) | 175(90) | 23(23) | 19(13) | 15(13) | 3(2) | 117(2) | view |
| E-GEOD-56517_A-AGIL-28_g3_g7 | 5(2) | 17(10) | 2(2) | 25(25) | 1(1) | 45(20) | 4(4) | 63(12) | 59(10) | 1(1) | 188(1) | view |
| E-GEOD-56517_A-AGIL-28_g4_g8 | 5(5) | 36(23) | 2(2) | 57(57) | 10(10) | 107(43) | 10(10) | 37(23) | 30(25) | 1(1) | 366(6) | view |
| E-GEOD-56788_g2_g7 | 1(1) | 21(20) | 2(2) | 95(95) | 6(6) | 178(75) | 3(3) | 21(20) | 17(17) | 3(2) | 262(3) | view |
| E-GEOD-57198_A-AFFY-141_g1_g2 | 29(3) | 13(4) | 10(5) | 14(14) | 2(2) | 21(9) | 1(1) | 62(1) | 56(3) | 1(1) | 95(0) | view |
| E-GEOD-57935_A-AFFY-141_g7_g3 | 4(4) | 23(21) | 2(2) | 97(97) | 2(2) | 175(72) | 3(3) | 17(14) | 15(15) | 2(2) | 249(6) | view |
| E-GEOD-58379_g1_g2 | 1(1) | 16(13) | 2(2) | 44(44) | 5(5) | 75(29) | 10(10) | 26(17) | 22(17) | 12(2) | 204(3) | view |
| E-GEOD-58966_g3_g6 | 1(1) | 27(18) | 41(32) | 51(50) | 3(3) | 88(39) | 4(4) | 43(22) | 37(27) | 1(1) | 373(1) | view |
| E-GEOD-59234_A-AFFY-141_g4_g3 | 2(2) | 14(10) | 2(2) | 34(34) | 3(3) | 65(29) | 7(7) | 46(17) | 40(20) | 1(1) | 233(2) | view |
| E-GEOD-60052_g1_g2 | 4(4) | 19(19) | 4(4) | 127(127) | 5(5) | 217(98) | 24(24) | 15(11) | 11(11) | 2(2) | 117(2) | view |
| E-GEOD-60590_g2_g1 | 1(1) | 33(25) | 2(2) | 73(73) | 5(5) | 124(50) | 3(3) | 30(20) | 26(26) | 1(1) | 336(4) | view |
| E-GEOD-64912_g1_g2 | 1(1) | 9(8) | 2(2) | 17(17) | 6(5) | 34(13) | 3(3) | 39(8) | 33(9) | 1(1) | 51(1) | view |
| E-GEOD-65166_A-AFFY-141_g2_g1 | 2(2) | 30(25) | 2(2) | 58(58) | 2(2) | 106(45) | 13(13) | 35(23) | 30(25) | 1(1) | 412(4) | view |
| E-GEOD-67898_g1_g2 | 15(7) | 19(14) | 2(2) | 35(35) | 7(7) | 62(30) | 9(9) | 38(18) | 31(22) | 1(1) | 231(6) | view |
| E-GEOD-71289_g8_g5 | 5(5) | 17(13) | 2(2) | 32(31) | 2(2) | 59(26) | 3(2) | 50(15) | 42(18) | 1(1) | 229(4) | view |
| E-GEOD-71289_g8_g7 | 2(2) | 12(12) | 2(2) | 20(20) | 6(6) | 36(15) | 2(2) | 32(11) | 26(11) | 1(1) | 28(1) | view |
| E-GEOD-71404_A-AFFY-44_g10_g1 | 6(6) | 15(14) | 4(4) | 29(29) | 5(5) | 51(26) | 8(8) | 29(17) | 23(15) | 1(1) | 134(3) | view |
| E-GEOD-80060_A-AFFY-44_g1_g2 | 5(3) | 33(24) | 2(2) | 65(65) | 3(3) | 116(54) | 13(13) | 33(25) | 30(23) | 1(1) | 437(4) | view |
| E-GEOD-81046_g6_g4 | 1(1) | 29(23) | 49(37) | 67(66) | 5(5) | 123(47) | 4(4) | 34(25) | 29(23) | 1(1) | 380(5) | view |
| E-GEOD-95132_g1_g2 | 5(5) | 24(22) | 3(3) | 84(84) | 3(3) | 143(59) | 3(3) | 22(19) | 21(17) | 7(2) | 244(3) | view |
| E-GEOD-9764_A-AFFY-44_g3_g2 | 1(1) | 25(23) | 2(2) | 116(116) | 4(4) | 210(94) | 26(26) | 15(12) | 13(13) | 4(2) | 116(2) | view |
| E-MEXP-1216_A-AFFY-44_g1_g3 | 4(4) | 23(22) | 2(2) | 111(111) | 7(7) | 191(90) | 2(2) | 13(9) | 11(10) | 2(2) | 80(2) | view |
| E-MEXP-3641_A-AFFY-44_g1_g2 | 5(5) | 28(24) | 2(2) | 57(57) | 2(2) | 98(48) | 12(12) | 28(22) | 25(21) | 5(2) | 285(5) | view |
| E-MTAB-2533_A-AFFY-141_g1_g2 | 2(2) | 18(10) | 2(2) | 37(37) | 2(2) | 65(28) | 3(2) | 57(24) | 56(27) | 1(1) | 282(1) | view |
| E-MTAB-2581_A-AFFY-141_g4_g2 | 3(3) | 14(13) | 2(2) | 87(87) | 2(2) | 165(65) | 2(2) | 20(18) | 21(18) | 8(3) | 177(2) | view |
| E-MTAB-3082_A-AFFY-141_g4_g2 | 3(3) | 31(28) | 2(2) | 108(108) | 3(3) | 210(82) | 2(2) | 18(16) | 16(15) | 2(2) | 155(2) | view |
| E-MTAB-3447_g4_g1 | 3(3) | 16(13) | 2(2) | 33(33) | 4(4) | 61(29) | 9(9) | 33(22) | 31(22) | 1(1) | 173(4) | view |
| E-MTAB-3447_g5_g3 | 1(1) | 30(25) | 74(52) | 92(92) | 3(3) | 174(76) | 3(2) | 26(20) | 20(18) | 1(1) | 475(3) | view |
| E-MTAB-3645_A-AFFY-141_g1_g5 | 3(3) | 31(24) | 2(2) | 77(77) | 2(2) | 126(62) | 10(10) | 32(22) | 24(22) | 7(2) | 361(2) | view |
| E-MTAB-3645_A-AFFY-141_g2_g1 | 5(5) | 18(18) | 2(2) | 101(101) | 8(8) | 170(74) | 3(3) | 16(11) | 15(13) | 2(2) | 161(4) | view |
| E-MTAB-3645_A-AFFY-141_g4_g8 | 1(1) | 29(27) | 66(48) | 80(80) | 4(4) | 140(67) | 3(3) | 30(26) | 28(26) | 1(1) | 452(4) | view |
| E-MTAB-4054_g2_g3 | 12(6) | 21(18) | 2(2) | 65(65) | 5(5) | 107(50) | 2(2) | 15(12) | 12(11) | 2(2) | 137(2) | view |
| E-MTAB-4511_g2_g1 | 4(4) | 26(23) | 2(2) | 118(118) | 3(3) | 230(90) | 2(2) | 19(18) | 16(14) | 2(2) | 144(1) | view |
| E-MTAB-4902_g1_g2 | 1(1) | 24(16) | 3(3) | 48(48) | 10(9) | 93(37) | 3(3) | 29(19) | 23(17) | 1(1) | 218(3) | view |
| E-MTAB-5121_A-MEXP-2183_g3_g6 | 6(4) | 20(17) | 74(52) | 90(90) | 6(6) | 152(74) | 2(2) | 18(16) | 14(12) | 2(2) | 133(2) | view |
| E-MTAB-5219_A-AFFY-141_g1_g4 | 6(6) | 14(13) | 2(2) | 59(59) | 2(2) | 103(51) | 3(2) | 20(18) | 16(15) | 3(2) | 226(4) | view |
| E-MTAB-5219_A-AFFY-141_g1_g6 | 3(3) | 25(23) | 2(2) | 93(93) | 7(7) | 175(82) | 3(2) | 20(16) | 19(16) | 3(3) | 229(5) | view |
| E-MTAB-5219_A-AFFY-141_g1_g9 | 10(4) | 19(14) | 2(2) | 47(47) | 2(2) | 76(33) | 9(9) | 42(22) | 33(24) | 1(1) | 306(4) | view |
| E-MTAB-5783_g2_g1 | 8(6) | 33(27) | 3(3) | 88(88) | 3(3) | 154(69) | 2(2) | 21(17) | 17(17) | 2(2) | 199(2) | view |
| E-MTAB-5873_g8_g1 | 8(6) | 30(26) | 2(2) | 96(96) | 7(7) | 177(79) | 19(19) | 21(17) | 17(15) | 2(2) | 297(3) | view |
| E-MTAB-5984_g4_g8 | 1(1) | 24(20) | 60(40) | 73(73) | 9(9) | 136(59) | 15(15) | 24(19) | 18(18) | 5(2) | 259(4) | view |
| E-MTAB-6045_A-GEOD-16686_g11_g7 | 7(3) | 21(20) | 3(3) | 92(92) | 8(8) | 166(85) | 20(20) | 15(12) | 12(12) | 5(2) | 179(3) | view |
| E-MTAB-6045_A-GEOD-16686_g17_g8 | 1(1) | 24(23) | 2(2) | 106(106) | 5(5) | 174(84) | 2(2) | 16(14) | 15(14) | 3(2) | 141(4) | view |
| E-MTAB-6045_A-GEOD-16686_g3_g7 | 4(4) | 20(17) | 2(2) | 50(50) | 8(8) | 100(44) | 11(11) | 23(17) | 18(15) | 9(3) | 192(3) | view |
| E-MTAB-6087_g12_g11 | 5(5) | 25(23) | 65(47) | 80(80) | 3(3) | 135(66) | 3(2) | 18(12) | 13(12) | 2(2) | 251(5) | view |
| E-MTAB-6087_g7_g6 | 3(3) | 26(25) | 3(3) | 56(56) | 3(3) | 98(45) | 2(2) | 18(13) | 17(16) | 6(2) | 200(2) | view |
| E-MTAB-6298_g9_g8 | 3(3) | 23(22) | 2(2) | 99(99) | 7(7) | 177(76) | 3(2) | 16(13) | 11(11) | 2(2) | 191(3) | view |
| E-MTAB-6556_g1_g3 | 5(5) | 21(20) | 2(2) | 95(95) | 8(8) | 156(84) | 15(15) | 15(12) | 10(9) | 3(2) | 66(1) | view |
| E-MTAB-6681_g3_g1 | 4(1) | 4(2) | 2(1) | 5(4) | 3(2) | 11(6) | 3(3) | 40(0) | 40(0) | 1(1) | 44(0) | view |
| E-MTAB-6681_g4_g2 | 1(1) | 22(15) | 36(23) | 43(43) | 4(4) | 88(35) | 6(6) | 46(22) | 43(23) | 1(1) | 336(1) | view |
| E-MTAB-6681_g6_g5 | 2(1) | 8(2) | 2(1) | 7(6) | 1(1) | 15(4) | 1(1) | 51(0) | 50(0) | 1(1) | 60(0) | view |
| E-MTAB-6848_A-AFFY-141_g2_g4 | 3(3) | 21(17) | 2(2) | 73(73) | 2(2) | 130(51) | 2(2) | 36(26) | 32(30) | 1(1) | 442(3) | view |
| E-MTAB-6849_g2_g1 | 1(1) | 24(22) | 2(2) | 116(116) | 11(11) | 200(89) | 3(3) | 18(12) | 14(13) | 8(2) | 170(2) | view |
| E-MTAB-69_A-AFFY-44_g3_g1 | 1(1) | 19(18) | 71(47) | 86(86) | 6(6) | 155(62) | 18(18) | 19(17) | 18(16) | 9(4) | 140(3) | view |
| E-MTAB-7000_g2_g4 | 2(2) | 21(21) | 2(2) | 83(83) | 3(3) | 155(71) | 3(2) | 24(20) | 20(19) | 5(2) | 212(3) | view |
| E-MTAB-7029_g5_g2 | 12(7) | 30(27) | 83(56) | 109(109) | 2(2) | 193(88) | 3(2) | 18(16) | 19(17) | 2(2) | 315(3) | view |
| E-MTAB-7061_g18_g11 | 4(4) | 19(19) | 2(2) | 102(102) | 3(3) | 181(77) | 2(2) | 24(20) | 18(17) | 3(3) | 329(3) | view |
| E-MTAB-7061_g18_g13 | 17(1) | 6(3) | 2(1) | 6(5) | 1(1) | 9(5) | 1(1) | 38(0) | 38(0) | 1(1) | 44(0) | view |
| E-MTAB-7061_g18_g14 | 21(1) | 4(3) | 2(2) | 4(4) | 2(2) | 6(4) | 1(1) | 22(2) | 22(2) | 1(1) | 18(1) | view |
| E-MTAB-7061_g18_g4 | 7(2) | 7(4) | 4(3) | 8(8) | 3(3) | 11(7) | 1(1) | 37(2) | 37(2) | 1(1) | 48(1) | view |
| E-MTAB-7061_g18_g6 | 1(1) | 15(14) | 2(2) | 26(26) | 10(9) | 39(18) | 5(5) | 28(11) | 25(10) | 6(2) | 126(1) | view |
| E-MTAB-7169_A-MEXP-2320_g2_g1 | 5(5) | 26(26) | 5(5) | 119(119) | 3(3) | 207(86) | 2(2) | 21(17) | 15(14) | 2(2) | 155(3) | view |
| E-MTAB-7294_g7_g3 | 3(3) | 22(22) | 2(2) | 89(89) | 3(3) | 175(62) | 2(2) | 20(19) | 19(17) | 2(2) | 180(1) | view |
| E-MTAB-7498_g3_g1 | 5(1) | 3(2) | 2(1) | 4(3) | 1(1) | 7(2) | 1(1) | 25(0) | 25(0) | 1(1) | 27(0) | view |
| E-MTAB-7672_A-AFFY-141_g6_g5 | 6(6) | 23(22) | 2(2) | 70(70) | 11(11) | 114(62) | 19(19) | 17(13) | 17(16) | 2(2) | 201(4) | view |
| E-MTAB-7884_g4_g1 | 6(1) | 16(10) | 2(2) | 35(35) | 3(3) | 54(25) | 5(5) | 59(12) | 60(13) | 1(1) | 240(0) | view |
| E-MTAB-7884_g5_g2 | 6(3) | 10(6) | 2(2) | 28(27) | 3(3) | 46(20) | 3(3) | 57(9) | 51(10) | 1(1) | 192(0) | view |
| E-MTAB-7938_g3_g2 | 1(1) | 12(8) | 12(9) | 12(12) | 2(2) | 24(10) | 1(1) | 60(3) | 58(3) | 1(1) | 116(0) | view |
| E-MTAB-8198_g2_g1 | 1(1) | 28(26) | 2(2) | 90(90) | 4(4) | 150(79) | 15(15) | 12(11) | 10(8) | 3(2) | 153(2) | view |
| E-MTAB-8214_g1_g2 | 4(4) | 30(29) | 2(2) | 109(109) | 7(7) | 192(92) | 3(3) | 19(15) | 16(15) | 2(2) | 158(3) | view |
| E-MTAB-8243_g4_g2 | 5(5) | 25(23) | 2(2) | 115(115) | 7(7) | 207(98) | 5(5) | 16(14) | 13(13) | 4(2) | 115(2) | view |
| E-MTAB-8572_g2_g1 | 1(1) | 23(21) | 2(2) | 66(66) | 9(9) | 115(57) | 11(11) | 27(22) | 28(25) | 1(1) | 307(4) | view |